Is there that you can manually manage your itunes Apps? That is, turn off the autosync, so that I can pick which apps are on the phone at a given time? When I try to turn the sync off on my iphone, it warns me that it will delete the applications, so I get freaked out... Does this work, just like it does with music?
Yeah. Only a fraction of my apps are on my device. I'm not usre exactly how it works (not on my computer with iTunes) but if you go to the "applications" tab in the device window (when you plug in you iPod) it should be pretty staight forward...
Its as simple as checking and unchecking the apps you want on your phone and then syncing. Uncheck the auto sync box and check the manual box before anything.